Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rpl35aO55142 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rpl35aO55142 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.04□□□□□ -0.48
Rpl35aO55142 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Gm9103-201ENSMUST00000119371 405 ntBASIC12.04□□□□□ -0.48
Rpl35aO55142 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Mir3081-201ENSMUST00000175305 84 ntBASIC12.04□□□□□ -0.48
Rpl35aO55142 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.04□□□□□ -0.48
Rpl35aO55142 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Rpl35aO55142 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rpl35aO55142 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.03□□□□□ -0.48
Rpl35aO55142 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Rpl35aO55142 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.03□□□□□ -0.48
Rpl35aO55142 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rpl35aO55142 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Rpl35aO55142 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl35aO55142 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl35aO55142 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl35aO55142 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl35aO55142 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rpl35aO55142 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl35aO55142 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rpl35aO55142 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.02□□□□□ -0.49
Rpl35aO55142 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.02□□□□□ -0.49
Rpl35aO55142 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rpl35aO55142 Gm10052-201ENSMUST00000168019 960 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms