Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Mir3113-201ENSMUST00000175478 76 ntBASIC17.76■□□□□ 0.43
Trdmt1O55055 Mir8117-201ENSMUST00000184773 107 ntBASIC17.76■□□□□ 0.43
Trdmt1O55055 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.76■□□□□ 0.43
Trdmt1O55055 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trdmt1O55055 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trdmt1O55055 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.75■□□□□ 0.43
Trdmt1O55055 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.75■□□□□ 0.43
Trdmt1O55055 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trdmt1O55055 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trdmt1O55055 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trdmt1O55055 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.74■□□□□ 0.43
Trdmt1O55055 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trdmt1O55055 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trdmt1O55055 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trdmt1O55055 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Trdmt1O55055 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.73■□□□□ 0.43
Trdmt1O55055 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.73■□□□□ 0.43
Trdmt1O55055 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.73■□□□□ 0.43
Trdmt1O55055 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trdmt1O55055 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trdmt1O55055 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trdmt1O55055 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.72■□□□□ 0.43
Trdmt1O55055 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trdmt1O55055 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trdmt1O55055 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trdmt1O55055 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trdmt1O55055 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Trdmt1O55055 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms