Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm44484-201ENSMUST00000199873 138 ntBASIC16.76■□□□□ 0.27
Cldn5O54942 Gm44466-201ENSMUST00000200264 138 ntBASIC16.76■□□□□ 0.27
Cldn5O54942 Gm44359-201ENSMUST00000200671 138 ntBASIC16.76■□□□□ 0.27
Cldn5O54942 Mzt1-203ENSMUST00000227948 952 ntBASIC16.76■□□□□ 0.27
Cldn5O54942 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn5O54942 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn5O54942 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn5O54942 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn5O54942 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cldn5O54942 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn5O54942 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.76■□□□□ 0.27
Cldn5O54942 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn5O54942 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn5O54942 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cldn5O54942 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldn5O54942 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.75■□□□□ 0.27
Cldn5O54942 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cldn5O54942 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.75■□□□□ 0.27
Cldn5O54942 Gm6296-201ENSMUST00000222599 943 ntBASIC16.75■□□□□ 0.27
Cldn5O54942 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.75■□□□□ 0.27
Cldn5O54942 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Cldn5O54942 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cldn5O54942 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn5O54942 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
Cldn5O54942 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cldn5O54942 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.74■□□□□ 0.27
Cldn5O54942 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.74■□□□□ 0.27
Cldn5O54942 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn5O54942 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.74■□□□□ 0.27
Cldn5O54942 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.73■□□□□ 0.27
Cldn5O54942 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Cldn5O54942 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Gm25406-201ENSMUST00000157599 105 ntBASIC16.73■□□□□ 0.27
Cldn5O54942 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cldn5O54942 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.73■□□□□ 0.27
Cldn5O54942 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.73■□□□□ 0.27
Cldn5O54942 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.73■□□□□ 0.27
Cldn5O54942 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cldn5O54942 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn5O54942 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cldn5O54942 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cldn5O54942 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cldn5O54942 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn5O54942 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.72■□□□□ 0.27
Cldn5O54942 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.72■□□□□ 0.27
Cldn5O54942 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.72■□□□□ 0.27
Cldn5O54942 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn5O54942 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms