Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Ccr6O54689 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.62□□□□□ -0.23
Ccr6O54689 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Ccr6O54689 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.62□□□□□ -0.23
Ccr6O54689 Gm42545-201ENSMUST00000202755 922 ntBASIC13.62□□□□□ -0.23
Ccr6O54689 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ccr6O54689 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Dio3-201ENSMUST00000097228 1449 ntBASIC13.62□□□□□ -0.23
Ccr6O54689 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ccr6O54689 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.61□□□□□ -0.23
Ccr6O54689 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.61□□□□□ -0.23
Ccr6O54689 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.61□□□□□ -0.23
Ccr6O54689 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ccr6O54689 Gm13148-201ENSMUST00000118892 745 ntBASIC13.61□□□□□ -0.23
Ccr6O54689 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Gm37292-201ENSMUST00000192062 758 ntBASIC13.61□□□□□ -0.23
Ccr6O54689 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ccr6O54689 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ccr6O54689 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ccr6O54689 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Ccr6O54689 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ccr6O54689 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccr6O54689 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Gm2559-201ENSMUST00000201323 363 ntBASIC13.6□□□□□ -0.23
Ccr6O54689 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
Ccr6O54689 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ccr6O54689 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.6□□□□□ -0.23
Ccr6O54689 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.6□□□□□ -0.23
Ccr6O54689 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ccr6O54689 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccr6O54689 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccr6O54689 Actl10-202ENSMUST00000226583 1501 ntBASIC13.59□□□□□ -0.23
Ccr6O54689 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccr6O54689 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccr6O54689 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccr6O54689 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Ccr6O54689 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccr6O54689 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccr6O54689 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms