Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clcn6O35454 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.38■□□□□ 0.37
Clcn6O35454 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Clcn6O35454 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.38■□□□□ 0.37
Clcn6O35454 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clcn6O35454 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.37■□□□□ 0.37
Clcn6O35454 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Clcn6O35454 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC17.37■□□□□ 0.37
Clcn6O35454 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clcn6O35454 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clcn6O35454 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Clcn6O35454 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.37■□□□□ 0.37
Clcn6O35454 AC154441.1-201ENSMUST00000223653 1006 ntBASIC17.37■□□□□ 0.37
Clcn6O35454 Prl7a1-203ENSMUST00000224852 1283 ntBASIC17.37■□□□□ 0.37
Clcn6O35454 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.37■□□□□ 0.37
Clcn6O35454 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.37■□□□□ 0.37
Clcn6O35454 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clcn6O35454 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Clcn6O35454 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Clcn6O35454 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Clcn6O35454 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Gm22693-201ENSMUST00000175049 442 ntBASIC17.36■□□□□ 0.37
Clcn6O35454 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clcn6O35454 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC17.36■□□□□ 0.37
Clcn6O35454 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clcn6O35454 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Clcn6O35454 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 AC151904.4-201ENSMUST00000219868 1319 ntBASIC17.36■□□□□ 0.37
Clcn6O35454 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Clcn6O35454 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.35■□□□□ 0.37
Clcn6O35454 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Gm44607-201ENSMUST00000205611 1090 ntBASIC17.35■□□□□ 0.37
Clcn6O35454 AC154417.1-201ENSMUST00000223876 476 ntBASIC17.35■□□□□ 0.37
Clcn6O35454 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Clcn6O35454 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.35■□□□□ 0.37
Clcn6O35454 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
Clcn6O35454 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Clcn6O35454 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Clcn6O35454 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Clcn6O35454 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Clcn6O35454 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms