Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf11O35235 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Gm12382-201ENSMUST00000122005 922 ntBASIC12.65□□□□□ -0.38
Tnfsf11O35235 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.65□□□□□ -0.38
Tnfsf11O35235 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf11O35235 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfsf11O35235 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.65□□□□□ -0.39
Tnfsf11O35235 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfsf11O35235 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.64□□□□□ -0.39
Tnfsf11O35235 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf11O35235 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Gm13158-201ENSMUST00000122007 736 ntBASIC12.63□□□□□ -0.39
Tnfsf11O35235 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tnfsf11O35235 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms