Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Gm13474-201ENSMUST00000122466 815 ntBASIC19.26■□□□□ 0.67
Hdac1O09106 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hdac1O09106 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.26■□□□□ 0.67
Hdac1O09106 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hdac1O09106 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.26■□□□□ 0.67
Hdac1O09106 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.26■□□□□ 0.67
Hdac1O09106 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Hdac1O09106 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hdac1O09106 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hdac1O09106 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.25■□□□□ 0.67
Hdac1O09106 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hdac1O09106 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hdac1O09106 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.25■□□□□ 0.67
Hdac1O09106 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hdac1O09106 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hdac1O09106 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Hdac1O09106 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hdac1O09106 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hdac1O09106 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Hdac1O09106 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.24■□□□□ 0.67
Hdac1O09106 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Hdac1O09106 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.24■□□□□ 0.67
Hdac1O09106 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Hdac1O09106 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hdac1O09106 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hdac1O09106 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC19.23■□□□□ 0.67
Hdac1O09106 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hdac1O09106 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hdac1O09106 Gm2274-201ENSMUST00000184539 609 ntBASIC19.23■□□□□ 0.67
Hdac1O09106 Gm29257-201ENSMUST00000186115 639 ntBASIC19.23■□□□□ 0.67
Hdac1O09106 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hdac1O09106 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac1O09106 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.22■□□□□ 0.67
Hdac1O09106 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac1O09106 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Hdac1O09106 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hdac1O09106 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms