Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sh2b3O09039 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
Sh2b3O09039 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sh2b3O09039 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh2b3O09039 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh2b3O09039 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Sh2b3O09039 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh2b3O09039 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh2b3O09039 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Sh2b3O09039 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Sh2b3O09039 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sh2b3O09039 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.37□□□□□ -0.11
Sh2b3O09039 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2b3O09039 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.37□□□□□ -0.11
Sh2b3O09039 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sh2b3O09039 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sh2b3O09039 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.36□□□□□ -0.11
Sh2b3O09039 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sh2b3O09039 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh2b3O09039 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh2b3O09039 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.36□□□□□ -0.11
Sh2b3O09039 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.36□□□□□ -0.11
Sh2b3O09039 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2b3O09039 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Gm12895-201ENSMUST00000122214 226 ntBASIC14.35□□□□□ -0.11
Sh2b3O09039 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Gm43347-201ENSMUST00000200226 580 ntBASIC14.35□□□□□ -0.11
Sh2b3O09039 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2b3O09039 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.35□□□□□ -0.11
Sh2b3O09039 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms