Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ebf3O08791 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ebf3O08791 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.75■□□□□ 0.27
Ebf3O08791 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.75■□□□□ 0.27
Ebf3O08791 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.75■□□□□ 0.27
Ebf3O08791 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.75■□□□□ 0.27
Ebf3O08791 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ebf3O08791 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ebf3O08791 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ebf3O08791 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf3O08791 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ebf3O08791 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.75■□□□□ 0.27
Ebf3O08791 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.74■□□□□ 0.27
Ebf3O08791 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.74■□□□□ 0.27
Ebf3O08791 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.74■□□□□ 0.27
Ebf3O08791 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ebf3O08791 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.74■□□□□ 0.27
Ebf3O08791 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf3O08791 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ebf3O08791 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.73■□□□□ 0.27
Ebf3O08791 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.73■□□□□ 0.27
Ebf3O08791 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.73■□□□□ 0.27
Ebf3O08791 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ebf3O08791 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.73■□□□□ 0.27
Ebf3O08791 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.73■□□□□ 0.27
Ebf3O08791 Mir5131-201ENSMUST00000175426 93 ntBASIC16.73■□□□□ 0.27
Ebf3O08791 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.73■□□□□ 0.27
Ebf3O08791 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.73■□□□□ 0.27
Ebf3O08791 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ebf3O08791 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ebf3O08791 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.73■□□□□ 0.27
Ebf3O08791 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Ebf3O08791 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ebf3O08791 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf3O08791 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.72■□□□□ 0.27
Ebf3O08791 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ebf3O08791 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf3O08791 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms