Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Gm11950-201ENSMUST00000121615 838 ntBASIC15.43■□□□□ 0.06
Sh3yl1O08641 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh3yl1O08641 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.42■□□□□ 0.06
Sh3yl1O08641 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sh3yl1O08641 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Gm44450-201ENSMUST00000199528 114 ntBASIC15.42■□□□□ 0.06
Sh3yl1O08641 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.42■□□□□ 0.06
Sh3yl1O08641 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Gm10819-201ENSMUST00000099988 561 ntBASIC15.42■□□□□ 0.06
Sh3yl1O08641 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh3yl1O08641 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Gm14859-201ENSMUST00000117752 357 ntBASIC15.41■□□□□ 0.06
Sh3yl1O08641 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Gm27704-201ENSMUST00000185094 107 ntBASIC15.41■□□□□ 0.06
Sh3yl1O08641 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh3yl1O08641 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Gm18421-201ENSMUST00000204122 625 ntBASIC15.4■□□□□ 0.06
Sh3yl1O08641 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Sh3yl1O08641 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Sh3yl1O08641 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms