Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18■□□□□ 0.47
B020004C17RikJ3QP07 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Rarb-207ENSMUST00000225921 2756 ntBASIC18■□□□□ 0.47
B020004C17RikJ3QP07 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
B020004C17RikJ3QP07 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
B020004C17RikJ3QP07 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gm44492-201ENSMUST00000197012 141 ntBASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gm44872-201ENSMUST00000207864 420 ntBASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gm19164-201ENSMUST00000210667 640 ntBASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.98■□□□□ 0.47
B020004C17RikJ3QP07 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
B020004C17RikJ3QP07 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms