Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Shisa8J3QNX5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Gm37856-201ENSMUST00000191634 999 ntBASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Shisa8J3QNX5 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Gm10698-201ENSMUST00000182663 604 ntBASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Gm38027-201ENSMUST00000192315 235 ntBASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Trmt13-210ENSMUST00000198454 880 ntBASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Il3ra-202ENSMUST00000223589 738 ntBASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.79□□□□□ -0.04
Shisa8J3QNX5 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shisa8J3QNX5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shisa8J3QNX5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.77□□□□□ -0.04
Shisa8J3QNX5 Gm7791-201ENSMUST00000219066 539 ntBASIC14.77□□□□□ -0.05
Shisa8J3QNX5 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Shisa8J3QNX5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Shisa8J3QNX5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms