Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim55G3X8Y1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim55G3X8Y1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim55G3X8Y1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Gm18671-201ENSMUST00000214826 683 ntBASIC16.68■□□□□ 0.26
Trim55G3X8Y1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.68■□□□□ 0.26
Trim55G3X8Y1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Gm37179-201ENSMUST00000194862 823 ntBASIC16.67■□□□□ 0.26
Trim55G3X8Y1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim55G3X8Y1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim55G3X8Y1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim55G3X8Y1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms