Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Zfp264-201ENSMUST00000208656 1563 ntBASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm11745-201ENSMUST00000121669 448 ntBASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm17968-201ENSMUST00000194902 784 ntBASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm21190-202ENSMUST00000196384 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm42619-201ENSMUST00000197564 1136 ntBASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nkx1-1G3UXB3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Gm27989-201ENSMUST00000184721 107 ntBASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Gm44683-201ENSMUST00000209088 484 ntBASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Gm19212-201ENSMUST00000216642 862 ntBASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 AC132446.1-201ENSMUST00000222655 226 ntBASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nkx1-1G3UXB3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Gm43125-201ENSMUST00000201724 730 ntBASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Gm9172-201ENSMUST00000212092 954 ntBASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 AC168059.2-201ENSMUST00000224473 333 ntBASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nkx1-1G3UXB3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Nkx1-1G3UXB3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Gm38157-201ENSMUST00000194178 1698 ntBASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Rprl2-201ENSMUST00000157150 290 ntBASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Gm5682-201ENSMUST00000173402 505 ntBASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Gm8825-201ENSMUST00000182565 998 ntBASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 AC172027.1-201ENSMUST00000217659 337 ntBASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nkx1-1G3UXB3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms