Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Gm18115-201ENSMUST00000221209 621 ntBASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdh1F7BJK1 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Mir1199-201ENSMUST00000117015 119 ntBASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Gm44450-201ENSMUST00000199528 114 ntBASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pcdh1F7BJK1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Gm36967-201ENSMUST00000193814 266 ntBASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Odf3b-204ENSMUST00000227834 930 ntBASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.56□□□□□ -0.08
Pcdh1F7BJK1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdh1F7BJK1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms