Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Col22a1E9Q7P1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col22a1E9Q7P1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Col22a1E9Q7P1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col22a1E9Q7P1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col22a1E9Q7P1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col22a1E9Q7P1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col22a1E9Q7P1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Gm27618-201ENSMUST00000183671 60 ntBASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Gm37277-201ENSMUST00000194052 1111 ntBASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Gm8344-201ENSMUST00000119813 856 ntBASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col22a1E9Q7P1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Gm13216-201ENSMUST00000117145 591 ntBASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col22a1E9Q7P1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col22a1E9Q7P1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col22a1E9Q7P1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col22a1E9Q7P1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col22a1E9Q7P1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Gm18489-201ENSMUST00000172565 551 ntBASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.5■□□□□ 0.87
Col22a1E9Q7P1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Gm24158-201ENSMUST00000175263 71 ntBASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Mir7085-201ENSMUST00000184353 66 ntBASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC20.49■□□□□ 0.87
Col22a1E9Q7P1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col22a1E9Q7P1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms