Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc85cE9Q6B2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc85cE9Q6B2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc85cE9Q6B2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc85cE9Q6B2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ccdc85cE9Q6B2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc85cE9Q6B2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc85cE9Q6B2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Gm24158-201ENSMUST00000175263 71 ntBASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc85cE9Q6B2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Gm18187-201ENSMUST00000196476 984 ntBASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc85cE9Q6B2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc85cE9Q6B2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 AC125350.2-201ENSMUST00000224737 727 ntBASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc85cE9Q6B2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm22065-201ENSMUST00000103753 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm22066-201ENSMUST00000103761 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm24932-201ENSMUST00000103763 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm24115-201ENSMUST00000103799 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm22190-201ENSMUST00000103827 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm22191-201ENSMUST00000103831 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm24721-201ENSMUST00000103849 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm28018-201ENSMUST00000103869 110 ntBASIC19.84■□□□□ 0.77
Ccdc85cE9Q6B2 Gm26399-201ENSMUST00000103937 110 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms