Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhb9E9Q5G2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb9E9Q5G2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb9E9Q5G2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Gm9172-201ENSMUST00000212092 954 ntBASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb9E9Q5G2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44357-201ENSMUST00000195897 142 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm19658-201ENSMUST00000196231 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44367-201ENSMUST00000196836 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44350-201ENSMUST00000197197 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44390-201ENSMUST00000197533 144 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44313-201ENSMUST00000198018 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44486-201ENSMUST00000198508 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44314-201ENSMUST00000199263 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44394-201ENSMUST00000199558 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44484-201ENSMUST00000199873 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44466-201ENSMUST00000200264 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Gm44359-201ENSMUST00000200671 138 ntBASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb9E9Q5G2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms