Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cpsf4lE9Q2N0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Gm14859-201ENSMUST00000117752 357 ntBASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cpsf4lE9Q2N0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.68□□□□□ -0.22
Cpsf4lE9Q2N0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cpsf4lE9Q2N0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cpsf4lE9Q2N0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms