Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Gm43068-201ENSMUST00000201095 1273 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.03□□□□□ -0.96
Herc1E9PZP8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Herc1E9PZP8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Herc1E9PZP8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
Herc1E9PZP8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Herc1E9PZP8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Herc1E9PZP8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gm10616-201ENSMUST00000205285 2127 ntBASIC9.02□□□□□ -0.97
Herc1E9PZP8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.02□□□□□ -0.97
Herc1E9PZP8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Herc1E9PZP8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC9.01□□□□□ -0.97
Herc1E9PZP8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Fcho2-208ENSMUST00000224992 2964 ntBASIC9.01□□□□□ -0.97
Herc1E9PZP8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Herc1E9PZP8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.01□□□□□ -0.97
Herc1E9PZP8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Gm2810-201ENSMUST00000118681 990 ntBASIC9.01□□□□□ -0.97
Herc1E9PZP8 Gm7775-201ENSMUST00000218871 853 ntBASIC9.01□□□□□ -0.97
Herc1E9PZP8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Herc1E9PZP8 Gm16198-201ENSMUST00000118766 670 ntBASIC9□□□□□ -0.97
Herc1E9PZP8 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC9□□□□□ -0.97
Herc1E9PZP8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Gm14767-201ENSMUST00000121559 586 ntBASIC9□□□□□ -0.97
Herc1E9PZP8 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9□□□□□ -0.97
Herc1E9PZP8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Gm44608-201ENSMUST00000206827 855 ntBASIC9□□□□□ -0.97
Herc1E9PZP8 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9□□□□□ -0.97
Herc1E9PZP8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9□□□□□ -0.97
Herc1E9PZP8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9□□□□□ -0.97
Herc1E9PZP8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms