Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Gm36967-201ENSMUST00000193814 266 ntBASIC17.14■□□□□ 0.33
Rfx8D3YU81 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Gm44430-201ENSMUST00000203376 995 ntBASIC17.14■□□□□ 0.33
Rfx8D3YU81 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.14■□□□□ 0.33
Rfx8D3YU81 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.14■□□□□ 0.33
Rfx8D3YU81 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.14■□□□□ 0.33
Rfx8D3YU81 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx8D3YU81 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.13■□□□□ 0.33
Rfx8D3YU81 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.13■□□□□ 0.33
Rfx8D3YU81 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfx8D3YU81 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx8D3YU81 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.11■□□□□ 0.33
Rfx8D3YU81 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx8D3YU81 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.1■□□□□ 0.33
Rfx8D3YU81 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.1■□□□□ 0.33
Rfx8D3YU81 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Gm14859-201ENSMUST00000117752 357 ntBASIC17.1■□□□□ 0.33
Rfx8D3YU81 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx8D3YU81 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms