Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gm12887B1AVM1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gm12887B1AVM1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Gm12887B1AVM1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.14□□□□□ -0.31
Gm12887B1AVM1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Gm12887B1AVM1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Gm11249-201ENSMUST00000117071 859 ntBASIC13.13□□□□□ -0.31
Gm12887B1AVM1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Gm37292-201ENSMUST00000192062 758 ntBASIC13.13□□□□□ -0.31
Gm12887B1AVM1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm12887B1AVM1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Gm13158-201ENSMUST00000122007 736 ntBASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm12887B1AVM1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm12887B1AVM1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm12887B1AVM1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm12887B1AVM1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm12887B1AVM1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm12887B1AVM1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms