Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a5A6H584 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Gm11478-201ENSMUST00000117851 599 ntBASIC12.17□□□□□ -0.46
Col6a5A6H584 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a5A6H584 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.17□□□□□ -0.46
Col6a5A6H584 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col6a5A6H584 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC12.17□□□□□ -0.46
Col6a5A6H584 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC12.17□□□□□ -0.46
Col6a5A6H584 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a5A6H584 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.16□□□□□ -0.46
Col6a5A6H584 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.16□□□□□ -0.46
Col6a5A6H584 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.16□□□□□ -0.46
Col6a5A6H584 Gm15487-201ENSMUST00000122373 465 ntBASIC12.16□□□□□ -0.46
Col6a5A6H584 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Col6a5A6H584 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col6a5A6H584 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.16□□□□□ -0.46
Col6a5A6H584 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a5A6H584 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col6a5A6H584 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.16□□□□□ -0.46
Col6a5A6H584 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.15□□□□□ -0.46
Col6a5A6H584 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Col6a5A6H584 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.15□□□□□ -0.46
Col6a5A6H584 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col6a5A6H584 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.15□□□□□ -0.46
Col6a5A6H584 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.15□□□□□ -0.46
Col6a5A6H584 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col6a5A6H584 Mir1247-201ENSMUST00000116706 82 ntBASIC12.15□□□□□ -0.46
Col6a5A6H584 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.15□□□□□ -0.46
Col6a5A6H584 Gm38294-201ENSMUST00000192831 381 ntBASIC12.15□□□□□ -0.46
Col6a5A6H584 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.15□□□□□ -0.46
Col6a5A6H584 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col6a5A6H584 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col6a5A6H584 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Gm27618-201ENSMUST00000183671 60 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Gm6180-201ENSMUST00000065243 498 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col6a5A6H584 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Gm15358-201ENSMUST00000119249 520 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.14□□□□□ -0.47
Col6a5A6H584 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a5A6H584 Mir3547-201ENSMUST00000175461 88 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.14□□□□□ -0.47
Col6a5A6H584 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Gm6266-201ENSMUST00000203844 806 ntBASIC12.14□□□□□ -0.47
Col6a5A6H584 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col6a5A6H584 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col6a5A6H584 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col6a5A6H584 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.13□□□□□ -0.47
Col6a5A6H584 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.13□□□□□ -0.47
Col6a5A6H584 Gm9385-201ENSMUST00000117563 472 ntBASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms