Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Gm25406-201ENSMUST00000157599 105 ntBASIC13.09□□□□□ -0.31
Chd6A3KFM7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chd6A3KFM7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chd6A3KFM7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chd6A3KFM7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chd6A3KFM7 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.08□□□□□ -0.32
Chd6A3KFM7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.08□□□□□ -0.32
Chd6A3KFM7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.08□□□□□ -0.32
Chd6A3KFM7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.08□□□□□ -0.32
Chd6A3KFM7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.08□□□□□ -0.32
Chd6A3KFM7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Chd6A3KFM7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.07□□□□□ -0.32
Chd6A3KFM7 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.07□□□□□ -0.32
Chd6A3KFM7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Chd6A3KFM7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.06□□□□□ -0.32
Chd6A3KFM7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd6A3KFM7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms