Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 CT030684.1-201ENSMUST00000227292 914 ntBASIC8.49□□□□□ -1.05
Ubr4A2AN08 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Gm5366-201ENSMUST00000215494 1338 ntBASIC8.49□□□□□ -1.05
Ubr4A2AN08 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Notumos-201ENSMUST00000151998 2659 ntBASIC8.49□□□□□ -1.05
Ubr4A2AN08 Gm14042-201ENSMUST00000120139 833 ntBASIC8.49□□□□□ -1.05
Ubr4A2AN08 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ubr4A2AN08 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Gm18766-201ENSMUST00000189811 808 ntBASIC8.48□□□□□ -1.05
Ubr4A2AN08 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Gm45668-201ENSMUST00000211271 493 ntBASIC8.48□□□□□ -1.05
Ubr4A2AN08 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Gm43138-201ENSMUST00000199123 708 ntBASIC8.48□□□□□ -1.05
Ubr4A2AN08 AC162801.1-201ENSMUST00000220612 198 ntBASIC8.48□□□□□ -1.05
Ubr4A2AN08 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Gm12091-201ENSMUST00000146791 830 ntBASIC8.48□□□□□ -1.05
Ubr4A2AN08 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Gm45141-201ENSMUST00000206502 1888 ntBASIC8.48□□□□□ -1.05
Ubr4A2AN08 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ubr4A2AN08 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm13047-201ENSMUST00000117116 815 ntBASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm13517-201ENSMUST00000120782 1495 ntBASIC8.47□□□□□ -1.05
Ubr4A2AN08 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm8768-201ENSMUST00000220020 826 ntBASIC8.47□□□□□ -1.05
Ubr4A2AN08 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm6218-201ENSMUST00000219812 628 ntBASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Gm15808-201ENSMUST00000119046 604 ntBASIC8.47□□□□□ -1.05
Ubr4A2AN08 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Ubr4A2AN08 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC8.46□□□□□ -1.05
Ubr4A2AN08 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms