Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 AL593843.1-201ENSMUST00000195891 145 ntBASIC25.38■■□□□ 1.65
Shroom2A2ALU4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC25.38■■□□□ 1.65
Shroom2A2ALU4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Gm8515-201ENSMUST00000194852 576 ntBASIC25.37■■□□□ 1.65
Shroom2A2ALU4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Shroom2A2ALU4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm4609-201ENSMUST00000106443 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm5138-201ENSMUST00000113842 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm15191-201ENSMUST00000117933 1000 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm12182-201ENSMUST00000118655 1008 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm13882-201ENSMUST00000120886 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm10284-201ENSMUST00000145057 1005 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm10481-201ENSMUST00000179228 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm2574-201ENSMUST00000181051 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm3200-201ENSMUST00000181493 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm4518-201ENSMUST00000182638 718 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm8330-201ENSMUST00000182754 1008 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm4575-201ENSMUST00000182991 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm8709-201ENSMUST00000183230 1012 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 AY702102-202ENSMUST00000194651 1173 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 AC151836.1-202ENSMUST00000226259 753 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm10293-201ENSMUST00000076317 1002 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Gm6316-201ENSMUST00000082064 1020 ntBASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Shroom2A2ALU4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Gm8602-201ENSMUST00000184045 607 ntBASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Shroom2A2ALU4 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Gm6745-201ENSMUST00000199216 526 ntBASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Gm6888-201ENSMUST00000221983 706 ntBASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Gm6180-201ENSMUST00000065243 498 ntBASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Gm12138-201ENSMUST00000122180 951 ntBASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Gm36967-201ENSMUST00000193814 266 ntBASIC25.34■■□□□ 1.65
Shroom2A2ALU4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC25.34■■□□□ 1.65
Shroom2A2ALU4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom2A2ALU4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom2A2ALU4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
Shroom2A2ALU4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom2A2ALU4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom2A2ALU4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC25.33■■□□□ 1.65
Shroom2A2ALU4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Shroom2A2ALU4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
Shroom2A2ALU4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC25.33■■□□□ 1.64
Shroom2A2ALU4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Shroom2A2ALU4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Gm9385-201ENSMUST00000117563 472 ntBASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Gm12859-201ENSMUST00000117834 427 ntBASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Gm25144-201ENSMUST00000179561 110 ntBASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Gm25352-201ENSMUST00000179815 110 ntBASIC25.32■■□□□ 1.64
Shroom2A2ALU4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC25.32■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms