Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav12d-1A0N8R0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12d-1A0N8R0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12d-1A0N8R0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav12d-1A0N8R0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.02□□□□□ -0.33
Trav12d-1A0N8R0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Gm11539-201ENSMUST00000119837 557 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Gm27463-201ENSMUST00000183569 57 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Gm3375-201ENSMUST00000203929 796 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav12d-1A0N8R0 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Gm27528-202ENSMUST00000222916 2012 ntBASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav12d-1A0N8R0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms