Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Il3ra-202ENSMUST00000223589 738 ntBASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Mir1199-201ENSMUST00000117015 119 ntBASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm7791-201ENSMUST00000219066 539 ntBASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13d-4A0A0G2JFX3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms