Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Dancr-204ENSMUST00000132389 2347 ntBASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm18115-201ENSMUST00000221209 621 ntBASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Mir3081-201ENSMUST00000175305 84 ntBASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Gm27742-201ENSMUST00000184667 60 ntBASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav13n-1A0A0G2JEU8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms