Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm6576-201ENSMUST00000169678 883 ntBASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm27405-201ENSMUST00000184201 112 ntBASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav3n-3A0A0G2JEM0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms