Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trbv30A0A0B4J1P1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trbv30A0A0B4J1P1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trbv30A0A0B4J1P1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.19□□□□□ -0.46
Trbv30A0A0B4J1P1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm14859-201ENSMUST00000117752 357 ntBASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm33142-201ENSMUST00000193913 867 ntBASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Gm44430-201ENSMUST00000203376 995 ntBASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv30A0A0B4J1P1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv30A0A0B4J1P1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms