Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm37025-201ENSMUST00000195159 829 ntBASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav4-3A0A0B4J1K1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm27000-201ENSMUST00000182943 842 ntBASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm7291-201ENSMUST00000199147 382 ntBASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav4-3A0A0B4J1K1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms