Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm13148-201ENSMUST00000118892 745 ntBASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm42545-201ENSMUST00000202755 922 ntBASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv3A0A0A6YYE2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm37292-201ENSMUST00000192062 758 ntBASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.5□□□□□ -0.41
Trbv3A0A0A6YYE2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm9731-201ENSMUST00000209480 747 ntBASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Actl10-202ENSMUST00000226583 1501 ntBASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm12382-201ENSMUST00000122005 922 ntBASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv3A0A0A6YYE2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms