Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-5A0A075B6B5 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Gm2559-201ENSMUST00000201323 363 ntBASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-5A0A075B6B5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 AV356131-201ENSMUST00000206201 750 ntBASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Gm9731-201ENSMUST00000209480 747 ntBASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-5A0A075B6B5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Gm12382-201ENSMUST00000122005 922 ntBASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav6-5A0A075B6B5 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms