Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.88□□□□□ -0.35
Trav17A0A075B655 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Actl10-202ENSMUST00000226583 1501 ntBASIC12.88□□□□□ -0.35
Trav17A0A075B655 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.88□□□□□ -0.35
Trav17A0A075B655 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.88□□□□□ -0.35
Trav17A0A075B655 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav17A0A075B655 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav17A0A075B655 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.87□□□□□ -0.35
Trav17A0A075B655 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.86□□□□□ -0.35
Trav17A0A075B655 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.86□□□□□ -0.35
Trav17A0A075B655 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Sybu-209ENSMUST00000228639 4113 ntBASIC12.86□□□□□ -0.35
Trav17A0A075B655 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Trav17A0A075B655 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms