Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav3-4A0A075B654 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Wdr70-203ENSMUST00000227371 1130 ntBASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav3-4A0A075B654 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Gm13146-201ENSMUST00000118508 780 ntBASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav3-4A0A075B654 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Gm15546-201ENSMUST00000122095 826 ntBASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav3-4A0A075B654 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms