Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm13436-201ENSMUST00000120418 567 ntBASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Gm13474-201ENSMUST00000122466 815 ntBASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav5-4A0A075B652 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Gm16061-201ENSMUST00000122167 857 ntBASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav5-4A0A075B652 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav5-4A0A075B652 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Trav5-4A0A075B652 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Gm7213-201ENSMUST00000215977 950 ntBASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Gm18115-201ENSMUST00000221209 621 ntBASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav5-4A0A075B652 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-4A0A075B652 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-4A0A075B652 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-4A0A075B652 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav5-4A0A075B652 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav5-4A0A075B652 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-4A0A075B652 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms