Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm12527-201ENSMUST00000117967 564 ntBASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Asic1-205ENSMUST00000228185 1818 ntBASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gm13186-201ENSMUST00000118031 316 ntBASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav15-2-dv6-2A0A075B650 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms