Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav13-1A0A075B644 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Gm27741-201ENSMUST00000185060 237 ntBASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Gm18421-201ENSMUST00000204122 625 ntBASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.53□□□□□ -0.56
Trav13-1A0A075B644 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trav13-1A0A075B644 Haglr-201ENSMUST00000100000 2085 ntBASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav13-1A0A075B644 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Gm29707-201ENSMUST00000196325 491 ntBASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-1A0A075B644 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms