Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.38□□□□□ -0.11
Trav10A0A075B642 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav10A0A075B642 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav10A0A075B642 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.37□□□□□ -0.11
Trav10A0A075B642 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav10A0A075B642 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Gm9013-201ENSMUST00000132939 882 ntBASIC14.36□□□□□ -0.11
Trav10A0A075B642 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Gm6623-201ENSMUST00000173570 544 ntBASIC14.36□□□□□ -0.11
Trav10A0A075B642 Gm23634-201ENSMUST00000175071 91 ntBASIC14.36□□□□□ -0.11
Trav10A0A075B642 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav10A0A075B642 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.36□□□□□ -0.11
Trav10A0A075B642 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Gm6659-201ENSMUST00000174752 547 ntBASIC14.35□□□□□ -0.11
Trav10A0A075B642 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Gm5587-201ENSMUST00000206270 674 ntBASIC14.35□□□□□ -0.11
Trav10A0A075B642 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav10A0A075B642 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav10A0A075B642 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.34□□□□□ -0.11
Trav10A0A075B642 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms