Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav4-2A0A075B638 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-2A0A075B638 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-2A0A075B638 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav4-2A0A075B638 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Gm12896-201ENSMUST00000118430 226 ntBASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav4-2A0A075B638 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav4-2A0A075B638 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4-2A0A075B638 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms