Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16d-dv11A0A075B617 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16d-dv11A0A075B617 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16d-dv11A0A075B617 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Gm4974-201ENSMUST00000209974 875 ntBASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16d-dv11A0A075B617 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms