Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav13d-1A0A075B606 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13d-1A0A075B606 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13d-1A0A075B606 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav13d-1A0A075B606 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Gm28033-201ENSMUST00000184224 96 ntBASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav13d-1A0A075B606 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Gm17971-201ENSMUST00000190239 806 ntBASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-1A0A075B606 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Gm27357-201ENSMUST00000183754 135 ntBASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-1A0A075B606 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms