Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-1A0A075B601 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav9-1A0A075B601 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-1A0A075B601 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-1A0A075B601 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Gm7213-201ENSMUST00000215977 950 ntBASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Gm18115-201ENSMUST00000221209 621 ntBASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-1A0A075B601 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav9-1A0A075B601 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Gm44450-201ENSMUST00000199528 114 ntBASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav9-1A0A075B601 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Gm16061-201ENSMUST00000122167 857 ntBASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Gm18421-201ENSMUST00000204122 625 ntBASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav9-1A0A075B601 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms