Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6-1A0A075B5Z8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.01□□□□□ -0.33
Trav6-1A0A075B5Z8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm18421-201ENSMUST00000204122 625 ntBASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 App-207ENSMUST00000227737 2827 ntBASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13□□□□□ -0.33
Trav6-1A0A075B5Z8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Gm11539-201ENSMUST00000119837 557 ntBASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6-1A0A075B5Z8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms