Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm25745-201ENSMUST00000174945 133 ntBASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav5-1A0A075B5Z7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm12497-201ENSMUST00000138778 237 ntBASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm25406-201ENSMUST00000157599 105 ntBASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav5-1A0A075B5Z7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Rps4l-201ENSMUST00000071745 943 ntBASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav5-1A0A075B5Z7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav5-1A0A075B5Z7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.83□□□□□ -0.19
Trav5-1A0A075B5Z7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav5-1A0A075B5Z7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms