Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL117351.1-201ENST00000438864 766 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AL121594.1-201ENST00000475906 575 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 RN7SKP256-201ENST00000517201 314 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AC092451.2-201ENST00000538746 658 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AC025678.1-201ENST00000567861 338 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 BNIP3P30-201ENST00000601184 574 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 WISP1-OT1-201ENST00000602893 642 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 BCRP9-201ENST00000605312 388 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AC093648.1-201ENST00000623546 606 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AL359757.2-201ENST00000624309 274 ntBASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.21□□□□□ -2.22
HDGFL3Q9Y3E1 Y_RNA.33-201ENST00000362591 102 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-655P-201ENST00000362858 107 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 Y_RNA.192-201ENST00000363977 102 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 SMIM11P1-201ENST00000369586 178 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-622P-201ENST00000384272 103 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 SNORA48.1-201ENST00000390879 135 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 RNA5SP100-201ENST00000410903 110 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 RNA5SP59-201ENST00000410922 110 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AL591212.2-201ENST00000433923 257 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC118469.1-201ENST00000442943 488 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AL606517.1-201ENST00000446914 387 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 CR383656.8-201ENST00000549046 145 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC092325.1-201ENST00000566449 554 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 MIR4769-201ENST00000584126 77 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 BNIP3P27-201ENST00000599991 412 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AP000942.3-201ENST00000603702 160 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AL022345.1-201ENST00000607292 135 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC022893.3-201ENST00000607665 437 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC097468.3-201ENST00000607956 456 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC004908.3-201ENST00000610248 625 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC090517.3-201ENST00000625170 141 ntBASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HDGFL3Q9Y3E1 AL161722.3-201ENST00000605789 2983 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-944P-201ENST00000364023 107 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 SNORA75B-201ENST00000384053 137 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-769P-201ENST00000384407 104 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 SNORD116-12-201ENST00000384468 92 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 CBX3P9-201ENST00000402326 552 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AC069282.1-201ENST00000411911 526 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 UBE2V1P10-201ENST00000414685 269 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 RNU1-123P-201ENST00000458950 160 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 SNORD97-201ENST00000459187 142 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 snoU13.14-201ENST00000459372 104 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AP001025.1-201ENST00000486139 332 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 MTCYBP18-201ENST00000501056 747 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AC116353.3-201ENST00000511215 249 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 VN1R82P-201ENST00000601481 356 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-88P-201ENST00000606801 100 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 AC009269.6-201ENST00000621778 588 ntBASIC1.19□□□□□ -2.22
HDGFL3Q9Y3E1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 CBX3P1-201ENST00000325243 554 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 Y_RNA.40-201ENST00000362645 93 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-1210P-201ENST00000363775 107 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 RNU6-395P-201ENST00000365662 106 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 AL139824.2-201ENST00000458731 1095 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 HMGB1P30-201ENST00000492455 606 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 AC010376.1-201ENST00000522101 334 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 MTCYBP33-201ENST00000575007 1130 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 AC174048.1-201ENST00000603389 144 ntBASIC1.18□□□□□ -2.22
HDGFL3Q9Y3E1 AL589994.2-201ENST00000621124 579 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 2354.7 ms