Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL591034.2-201ENST00000402839 359 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RN7SKP32-201ENST00000410167 303 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RNU2-8P-201ENST00000410727 190 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RNA5SP111-201ENST00000411386 101 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 EEF1A1P40-201ENST00000412883 573 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 UBE2V1P10-201ENST00000414685 269 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 MTND5P25-201ENST00000430499 799 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AL360271.2-201ENST00000447710 161 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AP004607.1-201ENST00000524456 203 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 BNIP3P8-201ENST00000597863 560 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 RPL30P11-203ENST00000598995 310 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AC073410.2-201ENST00000603240 332 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AC012360.2-201ENST00000609349 391 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AL133173.2-201ENST00000614270 90 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AC009159.2-201ENST00000617603 606 ntBASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.88□□□□□ -2.11
NUDCD3Q8IVD9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 ZNF702P-202ENST00000434269 1966 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 RNA5SP276-201ENST00000362580 94 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 U8.3-201ENST00000363321 132 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 RNU1-23P-201ENST00000363361 144 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-169P-201ENST00000365336 107 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AL512604.1-201ENST00000404812 257 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 CALM2P2-201ENST00000428512 440 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 MTATP6P16-201ENST00000434543 526 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AL353705.4-201ENST00000449661 238 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AC012308.1-201ENST00000451232 178 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 SNORA59A-201ENST00000459326 152 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 MTND1P22-201ENST00000510572 951 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 SNORA4.4-201ENST00000515921 135 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 Y_RNA.687-201ENST00000516558 91 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 SNORA48.11-201ENST00000517015 89 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 MIR3126-201ENST00000577443 74 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 AL670379.4-201ENST00000605279 254 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 MIR219B-201ENST00000637023 88 ntBASIC1.87□□□□□ -2.11
NUDCD3Q8IVD9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-1010P-201ENST00000362757 107 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-1159P-201ENST00000362933 107 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-371P-201ENST00000364283 108 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RNY4P34-201ENST00000364779 95 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 SNORD116-20-201ENST00000384529 92 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 MIR186-201ENST00000384988 86 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RPS3AP3-201ENST00000411933 242 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 PGBD4P6-201ENST00000421501 610 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AL445646.1-201ENST00000431784 216 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RNU1-86P-201ENST00000516108 154 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RNU1-107P-201ENST00000516617 154 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 CR383656.8-201ENST00000549046 145 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC233702.2-202ENST00000562547 291 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC093249.1-201ENST00000567049 203 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC109446.2-201ENST00000567872 497 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC090897.2-201ENST00000581715 130 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC087683.2-201ENST00000611384 326 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AL590808.1-201ENST00000618696 141 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 YWHAEP7-203ENST00000622054 312 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AL359740.1-201ENST00000624340 592 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC007494.3-201ENST00000624660 743 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC064859.1-201ENST00000624741 174 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 AC009487.4-201ENST00000624969 3585 ntBASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-179P-201ENST00000363350 107 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 SNORA25B-201ENST00000365507 128 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 RNA5SP425-201ENST00000410336 112 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 RNU6-195P-201ENST00000411352 109 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 RPL21P90-201ENST00000415692 466 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 AL365203.2-201ENST00000423444 196 ntBASIC1.85□□□□□ -2.11
NUDCD3Q8IVD9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms