Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MIR4506-201ENST00000584693 77 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCN3P51790 AL645944.1-201ENST00000603857 493 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 AC005858.4-201ENST00000623191 700 ntBASIC2.97□□□□□ -1.93
CLCN3P51790 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLCN3P51790 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCN3P51790 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCN3P51790 RNU1-105P-201ENST00000363470 161 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 MT-TD-201ENST00000387419 68 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 MTND4P28-201ENST00000426217 387 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCN3P51790 AL078601.1-201ENST00000444542 271 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 UBE2V1P7-201ENST00000446395 340 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 AC104472.2-201ENST00000469035 601 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 HMGB1P30-201ENST00000492455 606 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 AC079140.5-201ENST00000507882 310 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 RNU6-572P-201ENST00000516724 80 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCN3P51790 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCN3P51790 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.96□□□□□ -1.94
CLCN3P51790 MTCO3P23-201ENST00000561363 289 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 MIR4782-201ENST00000577987 79 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 HMGN2P15-201ENST00000585707 270 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 BNIP3P25-201ENST00000596023 559 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 VN1R80P-201ENST00000597126 338 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 AC009248.2-201ENST00000619826 254 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 AC100810.6-201ENST00000638068 285 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 AC121333.1-201ENST00000567488 2709 ntBASIC2.96□□□□□ -1.94
CLCN3P51790 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLCN3P51790 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CLCN3P51790 RNU4-82P-201ENST00000362443 140 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 Y_RNA.142-201ENST00000363491 102 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 RNU4-76P-201ENST00000364509 141 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 SNORA75B-201ENST00000384053 137 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 RNU6-166P-201ENST00000384371 107 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 RNU6-1127P-201ENST00000384580 107 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 MIR578-201ENST00000384828 96 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 AL592114.1-201ENST00000403842 483 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 AL356432.1-201ENST00000405809 419 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 RN7SKP32-201ENST00000410167 303 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 AL360271.2-201ENST00000447710 161 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCN3P51790 RNU6-1208P-201ENST00000459588 107 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 RPL21P99-201ENST00000480369 423 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCN3P51790 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCN3P51790 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 RNU6-1183P-201ENST00000517054 60 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCN3P51790 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.95□□□□□ -1.94
CLCN3P51790 RPS3AP23-202ENST00000574601 686 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCN3P51790 MTND4LP5-201ENST00000605152 292 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 uc_338.34-201ENST00000617467 174 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCN3P51790 IGHVIII-44-202ENST00000636235 289 ntBASIC2.95□□□□□ -1.94
CLCN3P51790 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCN3P51790 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLCN3P51790 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLCN3P51790 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLCN3P51790 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLCN3P51790 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCN3P51790 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLCN3P51790 AL355596.1-201ENST00000565399 3996 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 Y_RNA.11-201ENST00000362375 109 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 Y_RNA.100-201ENST00000363141 102 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RNU6-82P-201ENST00000363970 107 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 Y_RNA.399-201ENST00000383955 105 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RNU6-1027P-201ENST00000383998 107 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RNU6-434P-201ENST00000384376 107 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 Y_RNA.529-201ENST00000384586 119 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RNU6-658P-201ENST00000384606 106 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLCN3P51790 AL139039.1-201ENST00000401900 692 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AL606923.1-201ENST00000406616 190 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 Y_RNA.623-201ENST00000411128 95 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AL353621.1-201ENST00000418219 243 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 TRIAP1P1-201ENST00000427062 225 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AL669831.1-202ENST00000428504 417 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AL627311.1-201ENST00000431514 115 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.94□□□□□ -1.94
CLCN3P51790 IFNA20P-201ENST00000436840 528 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 GTF2IP13-201ENST00000438487 386 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RPS3P1-201ENST00000456781 192 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RNU6-329P-201ENST00000459618 107 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RPL21P93-201ENST00000480465 489 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 MTND4LP22-201ENST00000508209 276 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AC096725.1-201ENST00000514266 313 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 RPL7P20-201ENST00000520308 745 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 AC087241.2-201ENST00000535801 324 ntBASIC2.94□□□□□ -1.94
CLCN3P51790 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCN3P51790 OR11H5P-201ENST00000554039 926 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms