Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.37□□□□□ -2.03
BRCC3P46736 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
BRCC3P46736 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.37□□□□□ -2.03
BRCC3P46736 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.37□□□□□ -2.03
BRCC3P46736 AC017083.3-201ENST00000609955 700 ntBASIC2.37□□□□□ -2.03
BRCC3P46736 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCC3P46736 AC098679.4-201ENST00000624241 654 ntBASIC2.37□□□□□ -2.03
BRCC3P46736 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BRCC3P46736 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCC3P46736 AC099654.12-201ENST00000639868 649 ntBASIC2.37□□□□□ -2.03
BRCC3P46736 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCC3P46736 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
BRCC3P46736 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.37□□□□□ -2.03
BRCC3P46736 MTND5P17-201ENST00000418405 1603 ntBASIC2.37□□□□□ -2.03
BRCC3P46736 AC010329.5-201ENST00000623497 2174 ntBASIC2.37□□□□□ -2.03
BRCC3P46736 AC010889.1-201ENST00000566193 2666 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
BRCC3P46736 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
BRCC3P46736 SNORD3E-201ENST00000362899 217 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 RNU6-1120P-201ENST00000362988 108 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 SET-203ENST00000372688 801 ntTSL 2 BASIC2.36□□□□□ -2.03
BRCC3P46736 Y_RNA.554-201ENST00000384672 102 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 MIR578-201ENST00000384828 96 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 OR51A5P-201ENST00000415429 942 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCC3P46736 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCC3P46736 MTCYBP8-201ENST00000422855 651 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AL353729.1-201ENST00000425044 720 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AL606489.2-201ENST00000433886 234 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 FDX1P2-201ENST00000450769 375 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCC3P46736 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.36□□□□□ -2.03
BRCC3P46736 AC009646.1-201ENST00000510455 318 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 RNU6-143P-201ENST00000516942 93 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC025755.1-201ENST00000521306 278 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.36□□□□□ -2.03
BRCC3P46736 ADI1P3-201ENST00000549509 470 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC021739.1-201ENST00000559631 174 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC007151.1-201ENST00000572774 483 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.36□□□□□ -2.03
BRCC3P46736 MIR3616-201ENST00000584070 92 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AL670379.4-201ENST00000605279 254 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AC004492.1-201ENST00000607036 742 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 AP001486.3-201ENST00000615334 372 ntBASIC2.36□□□□□ -2.03
BRCC3P46736 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
BRCC3P46736 RNU6-371P-201ENST00000364283 108 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 RNU6-116P-201ENST00000384042 109 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 MIR301A-201ENST00000385261 86 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 RNU6-550P-201ENST00000391057 101 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 RNU2-49P-201ENST00000410666 184 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 MTCYBP5-201ENST00000423752 1135 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 MTCO3P30-201ENST00000426425 670 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCC3P46736 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.35□□□□□ -2.03
BRCC3P46736 MICF-203ENST00000432679 129 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 MTND1P1-201ENST00000445453 368 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC003071.1-201ENST00000451219 789 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCC3P46736 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCC3P46736 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCC3P46736 AC019235.1-201ENST00000503847 207 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 Y_RNA.704-201ENST00000516851 102 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 RNU6-1315P-201ENST00000517187 99 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.35□□□□□ -2.03
BRCC3P46736 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCC3P46736 AC103810.1-201ENST00000579873 453 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 OR1M4P-201ENST00000589199 287 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC068790.6-201ENST00000602558 258 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC008536.2-201ENST00000607284 349 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
BRCC3P46736 AL359880.1-201ENST00000621879 266 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 AC139792.3-201ENST00000623525 224 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 MIR3199-2-201ENST00000636243 86 ntBASIC2.35□□□□□ -2.03
BRCC3P46736 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
BRCC3P46736 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.35□□□□□ -2.03
BRCC3P46736 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.03
BRCC3P46736 RNU6-461P-201ENST00000364195 107 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.34□□□□□ -2.03
BRCC3P46736 RNU6-1215P-201ENST00000384441 102 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 SNORA11.4-201ENST00000408823 129 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 RNU6-1025P-201ENST00000410629 104 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 USP9YP6-201ENST00000413550 854 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.34□□□□□ -2.03
BRCC3P46736 OR6C66P-201ENST00000414917 930 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.34□□□□□ -2.03
BRCC3P46736 MTND1P18-201ENST00000448191 573 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.34□□□□□ -2.03
BRCC3P46736 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.34□□□□□ -2.03
BRCC3P46736 RNU7-182P-201ENST00000459009 62 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 AC079382.1-201ENST00000493346 557 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.34□□□□□ -2.03
BRCC3P46736 RNU6-506P-201ENST00000516553 94 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 RN7SKP219-201ENST00000516825 296 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.34□□□□□ -2.03
BRCC3P46736 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.34□□□□□ -2.03
BRCC3P46736 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.34□□□□□ -2.03
BRCC3P46736 MIR4703-201ENST00000577728 79 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 MIR1273C-201ENST00000578669 77 ntBASIC2.34□□□□□ -2.03
BRCC3P46736 MIR5583-1-201ENST00000580941 59 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms